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2YHG

Ab initio phasing of a nucleoside hydrolase-related hypothetical protein from Saccharophagus degradans that is associated with carbohydrate metabolism

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
CELLULOSE-BINDING PROTEINpolymer43747571.21UniProt (Q21PD3)
Pfam (PF07632)
Pfam (PF21027)
SACCHAROPHAGUS DEGRADANSSDE_182CT
2B, D
(A)
CALCIUM IONnon-polymer40.12Chemie (CA)
3C, H
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4E, F, G
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
5I
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6J, K, L
(A)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
7M
(A)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.21Chemie (BTB)
8N
(A)
waterwater18.0426Chemie (HOH)
Sequence modifications
A: 520 - 933 (UniProt: Q21PD3)
PDBExternal DatabaseDetails
Met 497-expression tag
Gly 498-expression tag
Ser 499-expression tag
Ser 500-expression tag
His 501-expression tag
His 502-expression tag
His 503-expression tag
His 504-expression tag
His 505-expression tag
His 506-expression tag
Ser 507-expression tag
Ser 508-expression tag
Gly 509-expression tag
Leu 510-expression tag
Val 511-expression tag
Pro 512-expression tag
Arg 513-expression tag
Gly 514-expression tag
Ser 515-expression tag
His 516-expression tag
Met 517-expression tag
Ala 518-expression tag
Arg 519-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight47571.2
Non-Polymers*Number of molecules12
Total formula weight684.8
All*Total formula weight48256.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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