2YDR
CpOGA D298N in complex with p53-derived O-GlcNAc peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | O-GLCNACASE NAGJ | polymer | 590 | 66130.0 | 1 | UniProt (Q0TR53) Pfam (PF02838) Pfam (PF07555) Pfam (PF21774) In PDB | CLOSTRIDIUM PERFRINGENS | BETA-N-ACETYLHEXOSAMINIDASE, BETA-HEXOSAMINIDASE, GH84, HEXOSAMINIDASE B, N-ACETYL-BETA-GLUCOSAMINIDASE, O-GLCNACASE, CPNAGJ |
| 2 | P | CELLULAR TUMOR ANTIGEN P53 | polymer | 11 | 1196.3 | 1 | UniProt (P04637) In PDB | HOMO SAPIENS | ANTIGEN NY-CO-13, PHOSPHOPROTEIN P53, TUMOR SUPPRESSOR P53 |
| 3 | A | CADMIUM ION | non-polymer | 112.4 | 18 | Chemie (CD) | |||
| 4 | P | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 5 | water | water | 18.0 | 103 | Chemie (HOH) |
Sequence modifications
A: 31 - 618 (UniProt: Q0TR53)
| PDB | External Database | Details |
|---|---|---|
| Gly 29 | - | expression tag |
| Ser 30 | - | expression tag |
| Asn 298 | Asp 298 | engineered mutation |
| Asp 388 | Asn 388 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 67326.3 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 2244.6 | |
| All* | Total formula weight | 69570.9 |
