2YDQ
CpOGA D298N in complex with hOGA-derived O-GlcNAc peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | O-GLCNACASE NAGJ | polymer | 590 | 66130.0 | 1 | UniProt (Q0TR53) Pfam (PF02838) Pfam (PF07555) Pfam (PF21774) | CLOSTRIDIUM PERFRINGENS | O-GLCNACASE, CPNAGJ, BETA-N-ACETYLHEXOSAMINIDASE, GH84, BETA-HEXOSAMINIDASE, HEXOSAMINIDASE B, N-ACETYL-BETA-GLUCOSAMINIDASE |
| 2 | B (T) | BIFUNCTIONAL PROTEIN NCOAT | polymer | 7 | 670.8 | 1 | UniProt (O60502) | HOMO SAPIENS | MENINGIOMA-EXPRESSED ANTIGEN 5, NUCLEAR CYTOPLASMIC O-GLCNACASE AND ACETYLTRANSFERASE, PROTEIN O-GLCNACASE, GLYCOSIDE HYDROLASE O-GLCNACASE, HEXOSAMINIDASE C, N-ACETYL-BETA-D-GLUCOSAMINIDASE, N-ACETYL-BETA-GLUCOSAMINIDASE, O-GLCNACASE, OGA |
| 3 | C, D, E, F, G... (A, T) | CADMIUM ION | non-polymer | 112.4 | 19 | Chemie (CD) | |||
| 4 | U (T) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 5 | W (A) | water | water | 18.0 | 104 | Chemie (HOH) |
Sequence modifications
A: 31 - 618 (UniProt: Q0TR53)
| PDB | External Database | Details |
|---|---|---|
| Gly 29 | - | expression tag |
| Ser 30 | - | expression tag |
| Asn 298 | Asp 298 | engineered mutation |
| Asp 388 | Asn 388 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 66800.8 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 2357.0 | |
| All* | Total formula weight | 69157.8 |
