2YB1
Structure of an amidohydrolase from Chromobacterium violaceum (EFI target EFI-500202) with bound Mn, AMP and phosphate.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | AMIDOHYDROLASE | polymer | 292 | 31366.4 | 1 | UniProt (Q7NXD4) Pfam (PF02811) | CHROMOBACTERIUM VIOLACEUM | |
| 2 | B, C, D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 3 | Chemie (MN) PubChem (27854) | |||
| 3 | E (A) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) PubChem (16397049) PubChem (16760266) PubChem (40459109) PubChem (46875232) PubChem (40467049) PubChem (40469468) PubChem (44348067) PubChem (45358029) PubChem (177678969) PubChem (6083) PubChem (46874558) PubChem (1549371) PubChem (92144436) PubChem (57358045) PubChem (12358354) PubChem (57879893) PubChem (57879902) PubChem (224) PubChem (122197642) PubChem (34768) PubChem (83862) PubChem (446048) PubChem (515384) PubChem (638042) PubChem (5316444) PubChem (5742864) PubChem (12163610) PubChem (12358355) PubChem (162290139) PubChem (162946266) PubChem (171699505) | |||
| 4 | F (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) PubChem (1061) | |||
| 5 | G (A) | water | water | 18.0 | 271 | Chemie (HOH) |
Sequence modifications
A: 1 - 285 (UniProt: Q7NXD4)
| PDB | External Database | Details |
|---|---|---|
| Ala 286 | - | expression tag |
| Glu 287 | - | expression tag |
| Asn 288 | - | expression tag |
| Leu 289 | - | expression tag |
| Tyr 290 | - | expression tag |
| Phe 291 | - | expression tag |
| Gln 292 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 31366.4 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 607.0 | |
| All* | Total formula weight | 31973.5 |
