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2Y2B

crystal structure of AmpD in complex with reaction products

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
1,6-ANHYDRO-N-ACETYLMURAMYL-L-ALANINE AMIDASE AMPDpolymer18720871.43UniProt (P82974)CITROBACTER FREUNDIIAMPD, N-ACETYLMURAMOYL-L-ALANINE AMIDASE
2D
(A)
2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACIDnon-polymer275.31Chemie (AH0)
PubChem (25201515)
PubChem (50932354)
PubChem (53249954)
PubChem (90658593)
PubChem (4471901)
PubChem (6602346)
PubChem (167008765)
PubChem (171041813)
PubChem (174001240)
3E
(A)
L-ALA-GAMMA-D-GLU-MESO-DIAMINOPIMELIC ACIDnon-polymer390.41Chemie (MHI)
PubChem (25203562)
PubChem (46239456)
PubChem (50909835)
PubChem (826)
PubChem (11509362)
4F, G, H
(A, B, C)
ZINC IONnon-polymer65.43Chemie (ZN)
5I, J, K
(A, B, C)
waterwater18.0556Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight62614.1
Non-Polymers*Number of molecules5
Total formula weight861.9
All*Total formula weight63476.0
*Water molecules are not included.

253795

PDB entries from 2026-05-20

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