2XZL
Upf1-RNA complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | ATP-DEPENDENT HELICASE NAM7 | polymer | 802 | 89997.1 | 1 | UniProt (P30771) Pfam (PF09416) Pfam (PF18141) Pfam (PF13086) Pfam (PF13087) | SACCHAROMYCES CEREVISIAE (BAKER'S YEAST) | UP FRAMESHIFT FACTOR 1, NONSENSE-MEDIATED MRNA DECAY PROTEIN 1, NUCLEAR ACCOMODATION OF MITOCHONDRIA 7 PROTEIN, UP-FRAMESHIFT SUPPRESSOR 1 |
| 2 | B (B) | 5- R(*UP*UP*UP*UP*UP*UP*UP*UP*U) -3 | polymer | 9 | 2710.5 | 1 | SYNTHETIC CONSTRUCT | ||
| 3 | C, D, E (A) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 4 | F (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 5 | G (A) | TETRAFLUOROALUMINATE ION | non-polymer | 103.0 | 1 | Chemie (ALF) | |||
| 6 | H (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | I, J, K, L, M... (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 12 | Chemie (1PE) | |||
| 8 | U, V (A, B) | water | water | 18.0 | 96 | Chemie (HOH) |
Sequence modifications
A: 54 - 850 (UniProt: P30771)
| PDB | External Database | Details |
|---|---|---|
| Gly 49 | - | expression tag |
| Ala 50 | - | expression tag |
| Ala 51 | - | expression tag |
| Ser 52 | - | expression tag |
| Met 53 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 92707.6 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 3610.0 | |
| All* | Total formula weight | 96317.6 |
