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2XLN

Crystal structure of a complex between Actinomadura R39 DD-peptidase and a boronate inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE,polymer48950083.84UniProt (P39045)
Pfam (PF02113)
ACTINOMADURA SPDD-CARBOXYPEPTIDASE, DD-PEPTIDASE, PENICILLIN-BINDING PROTEIN, PBP
2E, K, Q, V
(A, B, C, D)
[(1S)-1-{[(2,6-DIMETHOXYPHENYL)CARBONYL]AMINO}ETHYL]BORONIC ACIDnon-polymer253.14Chemie (EWA)
3F, G, H, I, L...
(A, B, C, D)
SULFATE IONnon-polymer96.117Chemie (SO4)
4AA, J
(D, A)
COBALT (II) IONnon-polymer58.92Chemie (CO)
5BA, CA, DA, EA
(A, B, C, D)
waterwater18.0816Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight200335.2
Non-Polymers*Number of molecules23
Total formula weight2763.2
All*Total formula weight203098.4
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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