2XJC
Crystal structure of the D52N variant of cytosolic 5'-nucleotidase II in complex with guanosine monophosphate and diadenosine tetraphosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | CYTOSOLIC PURINE 5'-NUCLEOTIDASE | polymer | 554 | 63956.8 | 1 | UniProt (P49902) Pfam (PF05761) | HOMO SAPIENS (HUMAN) | CYTOSOLIC 5'-NUCLEOTIDASE II |
| 2 | B (A) | GUANOSINE-5'-MONOPHOSPHATE | non-polymer | 363.2 | 1 | Chemie (5GP) | |||
| 3 | C (A) | BIS(ADENOSINE)-5'-TETRAPHOSPHATE | non-polymer | 836.4 | 1 | Chemie (B4P) PubChem (24867496) PubChem (44286171) PubChem (54592217) PubChem (58298222) PubChem (194) PubChem (21706) PubChem (118705482) PubChem (6603812) PubChem (11513435) PubChem (11957522) PubChem (13455592) PubChem (146121073) PubChem (171904579) PubChem (6328499) PubChem (10795591) PubChem (13455593) | |||
| 4 | D, E, F, G, H... (A) | GLYCEROL | non-polymer | 92.1 | 8 | Chemie (GOL) PubChem (753) | |||
| 5 | L (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 6 | M (A) | water | water | 18.0 | 394 | Chemie (HOH) |
Sequence modifications
A: 1 - 536 (UniProt: P49902)
| PDB | External Database | Details |
|---|---|---|
| Gly -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Ser -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Ser -7 | - | expression tag |
| Gly -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Val -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Asn 52 | Asp 52 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 63956.8 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1960.7 | |
| All* | Total formula weight | 65917.4 |
