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2Q5K

Crystal structure of lopinavir bound to wild type HIV-1 protease

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Proteasepolymer9910815.82UniProt (O38732)
UniProt (by SIFTS) (O38710)
Human immunodeficiency virus 1
2C, D, E, G
(A, B)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
PubChem (1061)
3F
(A)
N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDEnon-polymer628.81Chemie (AB1)
PubChem (17753816)
PubChem (3817)
PubChem (46930986)
PubChem (52987589)
PubChem (44402181)
PubChem (44585174)
PubChem (45357371)
PubChem (59651326)
PubChem (46782073)
PubChem (60039264)
PubChem (76968402)
PubChem (66509096)
PubChem (86574898)
PubChem (68490226)
PubChem (92727)
PubChem (70829193)
PubChem (6540554)
PubChem (124349221)
PubChem (93971976)
PubChem (6850809)
PubChem (124349222)
PubChem (124349223)
PubChem (169442991)
PubChem (129168894)
PubChem (133109001)
PubChem (155002926)
PubChem (171370625)
4H, I
(A, B)
waterwater18.0108Chemie (HOH)
Sequence modifications
A, B: 1 - 99 (UniProt: O38732)
PDBExternal DatabaseDetails
Lys 7Gln 7engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight21631.6
Non-Polymers*Number of molecules5
Total formula weight1008.7
All*Total formula weight22640.3
*Water molecules are not included.

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PDB entries from 2026-05-06

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