2P5O
Crystal structure of RB69 GP43 in complex with DNA containing an abasic site analog
Replaces: 1RV2Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | E, G, I, K | Template DNA | polymer | 18 | 5368.5 | 4 | |||
2 | F, H, J, L | Primer DNA | polymer | 15 | 4634.0 | 4 | |||
3 | A, B, C, D | DNA polymerase | polymer | 903 | 105827.6 | 4 | UniProt (Q38087) Pfam (PF03104) Pfam (PF00136) In PDB | Enterobacteria phage RB69 | Gp43 |
4 | water | water | 18.0 | 495 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 2 - 903 (UniProt: Q38087)
PDB | External Database | Details |
---|---|---|
Mse 1 | - | modified residue |
Mse 65 | Met 65 | modified residue |
Mse 75 | Met 75 | modified residue |
Mse 85 | Met 85 | modified residue |
Mse 189 | Met 189 | modified residue |
Mse 199 | Met 199 | modified residue |
Ala 222 | Asp 222 | engineered mutation |
Mse 256 | Met 256 | modified residue |
Ala 327 | Asp 327 | engineered mutation |
Mse 347 | Met 347 | modified residue |
Mse 408 | Met 408 | modified residue |
Mse 461 | Met 461 | modified residue |
Mse 462 | Met 462 | modified residue |
Mse 489 | Met 489 | modified residue |
Mse 541 | Met 541 | modified residue |
Mse 553 | Met 553 | modified residue |
Mse 592 | Met 592 | modified residue |
Mse 659 | Met 659 | modified residue |
Mse 670 | Met 670 | modified residue |
Mse 674 | Met 674 | modified residue |
Mse 681 | Met 681 | modified residue |
Mse 683 | Met 683 | modified residue |
Mse 715 | Met 715 | modified residue |
Mse 728 | Met 728 | modified residue |
Mse 752 | Met 752 | modified residue |
Mse 866 | Met 866 | modified residue |
Mse 900 | Met 900 | modified residue |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 463320.2 | |
All* | Total formula weight | 463320.2 |