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2OYL

Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Endoglycoceramidase IIpolymer48152122.52UniProt (O33853)Rhodococcus sp.
2C, D, H, I
(A, B)
SODIUM IONnon-polymer23.04Chemie (NA)
3E, J
(A, B)
(5R,6R,7R,8S)-7,8-dihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-6-yl beta-D-glucopyranosidenon-polymer362.32Chemie (IDC)
4F, G
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
5K, L
(A, B)
waterwater18.0849Chemie (HOH)
Sequence modifications
A, B: 31 - 490 (UniProt: O33853)
PDBExternal DatabaseDetails
Met 10-expression tag
Gly 11-expression tag
Ser 12-expression tag
Ser 13-expression tag
His 14-expression tag
His 15-expression tag
His 16-expression tag
His 17-expression tag
His 18-expression tag
His 19-expression tag
Ser 20-expression tag
Ser 21-expression tag
Gly 22-expression tag
Leu 23-expression tag
Val 24-expression tag
Pro 25-expression tag
Arg 26-expression tag
Gly 27-expression tag
Ser 28-expression tag
His 29-expression tag
Met 30-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight104245.1
Non-Polymers*Number of molecules8
Total formula weight1000.8
All*Total formula weight105245.9
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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