2OGA
X-ray crystal structure of S. venezuelae DesV in complex with ketimine intermediate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Transaminase | polymer | 399 | 43594.9 | 4 | UniProt (Q9ZGH4) Pfam (PF01041) In PDB | Streptomyces venezuelae | |
2 | A, B, C, D | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
3 | A, C | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
4 | A, B, C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
5 | A, B, C, D | N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid | non-polymer | 378.3 | 4 | Chemie (PGU) | |||
6 | water | water | 18.0 | 1010 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 379 (UniProt: Q9ZGH4)
PDB | External Database | Details |
---|---|---|
Met -19 | - | initiating methionine |
Gly -18 | - | cloning artifact |
Ser -17 | - | cloning artifact |
Ser -16 | - | cloning artifact |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | cloning artifact |
Ser -8 | - | cloning artifact |
Glu -7 | - | cloning artifact |
Asn -6 | - | cloning artifact |
Leu -5 | - | cloning artifact |
Tyr -4 | - | cloning artifact |
Phe -3 | - | cloning artifact |
Gln -2 | - | cloning artifact |
Gly -1 | - | cloning artifact |
His 0 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 174379.5 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 2011.2 | |
All* | Total formula weight | 176390.7 |