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2OE8

1.8 A X-ray crystal structure of Apramycin complex with RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3')polymer165129.11
2B
(B)
RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3')polymer175426.31
3C
(B)
APRAMYCINnon-polymer539.61Chemie (AM2)
PubChem (16757849)
PubChem (23305085)
PubChem (44119923)
PubChem (16395964)
PubChem (44784762)
PubChem (71428)
PubChem (45105104)
PubChem (23958199)
PubChem (52949248)
PubChem (57397142)
PubChem (439519)
PubChem (71306481)
PubChem (71313473)
PubChem (53393693)
PubChem (73951969)
PubChem (89903933)
PubChem (3081545)
PubChem (92328352)
PubChem (92328354)
PubChem (96358449)
PubChem (96358446)
PubChem (102565449)
PubChem (6427043)
PubChem (6604396)
PubChem (122581310)
PubChem (6713994)
PubChem (124511479)
PubChem (124717614)
PubChem (124717616)
PubChem (92328353)
PubChem (92328355)
PubChem (10098771)
PubChem (96358443)
PubChem (96358448)
PubChem (6710735)
PubChem (134693919)
PubChem (118410308)
PubChem (118410321)
PubChem (134814278)
PubChem (12898620)
PubChem (137628585)
PubChem (138107157)
PubChem (124507110)
PubChem (124511478)
PubChem (124511480)
PubChem (124717613)
PubChem (124717615)
PubChem (155802492)
PubChem (162960550)
PubChem (162960552)
PubChem (164114074)
PubChem (126541504)
PubChem (126541519)
PubChem (171317955)
PubChem (126969597)
PubChem (129715889)
PubChem (131632422)
PubChem (134780435)
PubChem (134780436)
PubChem (137706136)
PubChem (140891139)
PubChem (145998733)
PubChem (162960551)
PubChem (172433808)
4D, E
(A, B)
waterwater18.0151Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight10555.4
Non-Polymers*Number of molecules1
Total formula weight539.6
All*Total formula weight11095.0
*Water molecules are not included.

253389

PDB entries from 2026-05-13

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