2NZD
Nucleosome core particle containing 145 bp of DNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | I | DNA (145-MER) | polymer | 145 | 44749.7 | 1 | |||
2 | J | DNA (145-MER) | polymer | 145 | 44740.6 | 1 | |||
3 | A, E | Histone H3 | polymer | 135 | 15303.9 | 2 | GenBank (288992) Pfam (PF00125) UniProt (by SIFTS) (P84233) In PDB | Xenopus laevis (African clawed frog) | |
4 | B, F | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) In PDB | Xenopus laevis (African clawed frog) | |
5 | C, G | histone H2A | polymer | 119 | 12941.1 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) In PDB | Xenopus laevis (African clawed frog) | |
6 | D, H | Histone H2B | polymer | 125 | 13848.1 | 2 | UniProt (P02281) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | H2B1.1 |
7 | I, J, E | MANGANESE (II) ION | non-polymer | 54.9 | 11 | Chemie (MN) | |||
8 | water | water | 18.0 | 122 | Chemie (HOH) |
Sequence modifications
A, E: 1 - 135 (GenBank: 288992)
D, H: -2 - 122 (UniProt: P02281)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | variant |
Ala 111 | Gly 112 | variant |
PDB | External Database | Details |
---|---|---|
Thr 29 | Ser 32 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 196203.0 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 604.3 | |
All* | Total formula weight | 196807.3 |