2NZD
Nucleosome core particle containing 145 bp of DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (I) | DNA (145-MER) | polymer | 145 | 44749.7 | 1 | |||
| 2 | B (J) | DNA (145-MER) | polymer | 145 | 44740.6 | 1 | |||
| 3 | C, G (A, E) | Histone H3 | polymer | 135 | 15303.9 | 2 | GenBank (288992) Pfam (PF00125) UniProt (by SIFTS) (P84233) | Xenopus laevis (African clawed frog) | |
| 4 | D, H (B, F) | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
| 5 | E, I (C, G) | histone H2A | polymer | 119 | 12941.1 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) | Xenopus laevis (African clawed frog) | |
| 6 | F, J (D, H) | Histone H2B | polymer | 125 | 13848.1 | 2 | UniProt (P02281) Pfam (PF00125) | Xenopus laevis (African clawed frog) | H2B1.1 |
| 7 | K, L, M, N, O... (I, J, E) | MANGANESE (II) ION | non-polymer | 54.9 | 11 | Chemie (MN) | |||
| 8 | AA, BA, CA, DA, EA... (D, E, F, G, H...) | water | water | 18.0 | 122 | Chemie (HOH) |
Sequence modifications
A, E: 1 - 135 (GenBank: 288992)
D, H: -2 - 122 (UniProt: P02281)
| PDB | External Database | Details |
|---|---|---|
| Ala 102 | Gly 103 | variant |
| Ala 111 | Gly 112 | variant |
| PDB | External Database | Details |
|---|---|---|
| Thr 29 | Ser 32 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 196203.0 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 604.3 | |
| All* | Total formula weight | 196807.3 |
