2JLY
Dengue virus 4 NS3 helicase in complex with ssRNA and ADP-Phosphate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | SERINE PROTEASE SUBUNIT NS3 | polymer | 451 | 51337.5 | 2 | UniProt (Q2YHF0) Pfam (PF07652) Pfam (PF20907) | DENGUE VIRUS 4 | DENV4 NS3 HELICASE, NON-STRUCTURAL PROTEIN 3 |
2 | C, D (C, D) | 5'-R(*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3' | polymer | 12 | 3803.4 | 2 | |||
3 | E, I (A, B) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
4 | F, J (A, B) | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
5 | G, K (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
6 | H, L (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
7 | M, N, O, P (A, B, C, D) | water | water | 18.0 | 380 | Chemie (HOH) |
Sequence modifications
A, B: 168 - 171 (PDB: 2JLY)
A, B: 172 - 618 (UniProt: Q2YHF0)
A, B: 172 - 618 (UniProt: Q2YHF0)
PDB | External Database | Details |
---|---|---|
Leu 213 | Lys 1687 | conflict |
Asp 250 | Glu 1724 | conflict |
Cys 292 | Ser 1766 | conflict |
Ser 321 | Thr 1795 | conflict |
Arg 381 | Lys 1855 | conflict |
Lys 480 | Arg 1954 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 110281.6 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1338.4 | |
All* | Total formula weight | 111620.0 |