2J8F
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a disaccharide- pentapeptide)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | LYSOZYME | polymer | 339 | 39220.4 | 1 | UniProt (P15057) Pfam (PF01183) Pfam (PF01473) | BACTERIOPHAGE CP-1 | ENDOLYSIN, MURAMIDASE, CP-1 LYSIN, CPL-1 |
| 2 | B, C (B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside | branched | 510.5 | 2 | In PDB GlyTouCan (G69619HL) | |||
| 3 | D, E (A) | ALANINE | non-polymer | 89.1 | 2 | Chemie (ALA) | |||
| 4 | F (A) | D-GLUTAMIC ACID | non-polymer | 147.1 | 1 | Chemie (DGL) | |||
| 5 | G (A) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 6 | H (A) | water | water | 18.0 | 333 | Chemie (HOH) |
Sequence modifications
A: 1 - 339 (UniProt: P15057)
| PDB | External Database | Details |
|---|---|---|
| Gln 94 | Glu 94 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 39220.4 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1021.0 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 371.3 | |
| All* | Total formula weight | 40612.7 |
