2J0G
L-ficolin complexed to N-acetyl-mannosamine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | FICOLIN-2 | polymer | 218 | 24729.3 | 6 | UniProt (Q15485) Pfam (PF00147) | HOMO SAPIENS (HUMAN) | COLLAGEN/FIBRINOGEN DOMAIN-CONTAINING PROTEIN 2, L-FICOLIN, FICOLIN-B, SERUM LECTIN P35, EBP-37, HUCOLIN |
| 2 | G (G) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G17392HI) | |||
| 3 | H (H) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G47477HI) | |||
| 4 | I, K, M, N, P... (A, B, C, D, E...) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 5 | J, L, O, Q (B, C, E, F) | 2-acetamido-2-deoxy-alpha-D-mannopyranose | non-polymer | 221.2 | 4 | Chemie (BM3) | |||
| 6 | R (F) | alpha-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (MAN) | |||
| 7 | T, U, V, W, X... (A, B, C, D, E...) | water | water | 18.0 | 46 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 71 - 71 (PDB: 2J0G)
A, B, C, D, E, F: 72 - 288 (UniProt: Q15485)
A, B, C, D, E, F: 72 - 288 (UniProt: Q15485)
| PDB | External Database | Details |
|---|---|---|
| Thr 168 | Val 193 | conflict |
| Thr 247 | Val 272 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 148375.9 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1627.5 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1305.5 | |
| All* | Total formula weight | 151308.9 |
