2IL1
Crystal structure of a predicted human GTPase in complex with GDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Rab12 | polymer | 192 | 21930.2 | 1 | UniProt (Q86YS6) Pfam (PF00071) UniProt (by SIFTS) (Q6IQ22) | Homo sapiens (human) | |
| 2 | B (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 3 | C (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) PubChem (271) | |||
| 4 | D (A) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 1 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) | |||
| 5 | E, F, G, H, I... (A) | UNKNOWN ATOM OR ION | non-polymer | 6 | Chemie (UNX) | ||||
| 6 | K (A) | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A: 132 - 304 (UniProt: Q86YS6)
| PDB | External Database | Details |
|---|---|---|
| Met 113 | - | initiating methionine |
| Gly 114 | - | cloning artifact |
| Ser 115 | - | cloning artifact |
| Ser 116 | - | cloning artifact |
| His 117 | - | expression tag |
| His 118 | - | expression tag |
| His 119 | - | expression tag |
| His 120 | - | expression tag |
| His 121 | - | expression tag |
| His 122 | - | expression tag |
| Ser 123 | - | cloning artifact |
| Ser 124 | - | cloning artifact |
| Gly 125 | - | cloning artifact |
| Leu 126 | - | cloning artifact |
| Val 127 | - | cloning artifact |
| Pro 128 | - | cloning artifact |
| Arg 129 | - | cloning artifact |
| Gly 130 | - | cloning artifact |
| Ser 131 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 21930.2 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 507.6 | |
| All* | Total formula weight | 22437.8 |
