2IDB
Crystal Structure of 3-octaprenyl-4-hydroxybenzoate decarboxylase (UbiD) from Escherichia coli, Northeast Structural Genomics Target ER459.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | polymer | 505 | 57346.3 | 3 | UniProt (P0AAB4) Pfam (PF20695) Pfam (PF01977) Pfam (PF20696) | Escherichia coli | Polyprenyl p-hydroxybenzoate decarboxylase, 3-octaprenyl-4-hydroxybenzoate decarboxylase, UBID |
| 2 | D, F, G (A, B, C) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 3 | Chemie (1PE) | |||
| 3 | E, H, I (A, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 4 | J, K, L (A, B, C) | water | water | 18.0 | 154 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 497 (UniProt: P0AAB4)
| PDB | External Database | Details |
|---|---|---|
| Mse 1 | Met 1 | modified residue |
| Mse 4 | Met 4 | modified residue |
| Mse 60 | Met 60 | modified residue |
| Mse 75 | Met 75 | modified residue |
| Mse 77 | Met 77 | modified residue |
| Mse 120 | Met 120 | modified residue |
| Mse 148 | Met 148 | modified residue |
| Mse 191 | Met 191 | modified residue |
| Mse 382 | Met 382 | modified residue |
| Mse 383 | Met 383 | modified residue |
| Mse 393 | Met 393 | modified residue |
| Mse 421 | Met 421 | modified residue |
| Mse 451 | Met 451 | modified residue |
| Leu 498 | - | expression tag |
| Glu 499 | - | expression tag |
| His 500 | - | expression tag |
| His 501 | - | expression tag |
| His 502 | - | expression tag |
| His 503 | - | expression tag |
| His 504 | - | expression tag |
| His 505 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 172038.8 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 901.0 | |
| All* | Total formula weight | 172939.9 |






