2FMD
Structural basis of carbohydrate recognition by Bowringia milbraedii seed agglutinin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lectin | polymer | 240 | 25583.0 | 1 | UniProt (P42088) Pfam (PF00139) | Bowringia mildbraedii | Agglutinin, BMA |
| 2 | B (B) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose | branched | 342.3 | 1 | In PDB BIRD (PRD_900111) GlyTouCan (G53402KW) | 2alpha-alpha-mannobiose | ||
| 3 | C (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 4 | D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 5 | E (A) | water | water | 18.0 | 213 | Chemie (HOH) |
Sequence modifications
A: 1 - 240 (UniProt: P42088)
| PDB | External Database | Details |
|---|---|---|
| Asp 86 | Ala 86 | SEE REMARK 999 |
| Ser 125 | Ala 125 | SEE REMARK 999 |
| Asx 204 | Gly 204 | SEE REMARK 999 |
| Asx 206 | Pro 206 | SEE REMARK 999 |
| Trp 207 | Asp 207 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 25583.0 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 342.3 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 95.0 | |
| All* | Total formula weight | 26020.3 |
