2F5X
Structure of periplasmic binding protein BugD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | BugD | polymer | 312 | 34030.3 | 3 | GenBank (33594322) Pfam (PF03401) UniProt (by SIFTS) (Q7VTS1) | Bordetella pertussis Tohama I | |
| 2 | D, E, F (A, B, C) | ASPARTIC ACID | non-polymer | 133.1 | 3 | Chemie (ASP) | |||
| 3 | G, H, I (A, B, C) | water | water | 18.0 | 1107 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 300 (GenBank: 33594322)
| PDB | External Database | Details |
|---|---|---|
| Met -11 | - | cloning artifact |
| Arg -10 | - | cloning artifact |
| Gly -9 | - | cloning artifact |
| Ser -8 | - | cloning artifact |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| Gly -1 | - | cloning artifact |
| Ser 0 | - | cloning artifact |
| Mse 9 | Met 34 | modified residue |
| Mse 30 | Met 55 | modified residue |
| Mse 68 | Met 93 | modified residue |
| Mse 101 | Met 126 | modified residue |
| Mse 145 | Met 170 | modified residue |
| Mse 166 | Met 191 | modified residue |
| Mse 177 | Met 202 | modified residue |
| Mse 213 | Met 238 | modified residue |
| Mse 229 | Met 254 | modified residue |
| Mse 260 | Met 285 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 102091.0 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 399.3 | |
| All* | Total formula weight | 102490.4 |






