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2E2H

RNA polymerase II elongation complex at 5 mM Mg2+ with GTP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(R)
5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'polymer103264.01
2B
(T)
28-MER DNA template strandpolymer288510.51
3C
(N)
5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'polymer144286.81
4D
(A)
DNA-directed RNA polymerase II largest subunitpolymer1733191821.61UniProt (P04050)
Pfam (PF04997)
Pfam (PF05001)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04992)
Pfam (PF04990)
Saccharomyces cerevisiae (baker's yeast)RNA polymerase II subunit 1, B220
5E
(B)
DNA-directed RNA polymerase II 140 kDa polypeptidepolymer1224138937.31UniProt (P08518)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF04566)
Pfam (PF04567)
Pfam (PF00562)
Pfam (PF04560)
Saccharomyces cerevisiae (baker's yeast)B150, RNA polymerase II subunit 2
6F
(C)
DNA-directed RNA polymerase II 45 kDa polypeptidepolymer31835330.51UniProt (P16370)
Pfam (PF01193)
Pfam (PF01000)
Saccharomyces cerevisiae (baker's yeast)B44.5
7G
(E)
DNA-directed RNA polymerases I, II, and III 27 kDa polypeptidepolymer21525117.11UniProt (P20434)
Pfam (PF03871)
Pfam (PF01191)
Saccharomyces cerevisiae (baker's yeast)ABC27
8H
(F)
DNA-directed RNA polymerases I, II, and III 23 kDa polypeptidepolymer15517931.81UniProt (P20435)
Pfam (PF01192)
Saccharomyces cerevisiae (baker's yeast)ABC23
9I
(H)
DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptidepolymer14616525.41UniProt (P20436)
Pfam (PF03870)
Saccharomyces cerevisiae (baker's yeast)ABC14.4
10J
(I)
DNA-directed RNA polymerase II subunit 9polymer12214308.21UniProt (P27999)
Pfam (PF02150)
Pfam (PF01096)
Saccharomyces cerevisiae (baker's yeast)DNA-directed RNA polymerase II 14.2 kDa polypeptide, B12.6
11K
(J)
DNA-directed RNA polymerases I/II/III subunit 10polymer708290.71UniProt (P22139)
Pfam (PF01194)
Saccharomyces cerevisiae (baker's yeast)DNA- directed RNA polymerases I, II, and III 8.3 kDa polypeptide, ABC10- beta, ABC8
12L
(K)
DNA-directed RNA polymerase II 13.6 kDa polypeptidepolymer12013633.51UniProt (P38902)
Pfam (PF13656)
Saccharomyces cerevisiae (baker's yeast)B13.6
13M
(L)
DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptidepolymer707730.01UniProt (P40422)
Pfam (PF03604)
Saccharomyces cerevisiae (baker's yeast)ABC10-alpha
14N
(T)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
15O, P, S, T, U...
(A, B, C, I, J...)
ZINC IONnon-polymer65.48Chemie (ZN)
16Q, R
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight485687.3
Non-Polymers*Number of molecules11
Total formula weight1095.1
All*Total formula weight486782.4
*Water molecules are not included.

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PDB entries from 2024-10-30

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