2E2H
RNA polymerase II elongation complex at 5 mM Mg2+ with GTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Collection date | 2006-05-08 |
Wavelength(s) | 0.98 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 171.108, 222.005, 195.163 |
Unit cell angles | 90.00, 102.61, 90.00 |
Refinement procedure
Resolution | 45.080 - 3.950 |
R-factor | 0.29421 |
Rwork | 0.290 |
R-free | 0.36755 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sfo |
RMSD bond length | 0.014 |
RMSD bond angle | 1.261 |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.090 |
High resolution limit [Å] | 3.950 | 3.950 |
Number of reflections | 60760 | |
<I/σ(I)> | 10.3 | 2.3 |
Completeness [%] | 98.3 | 92.2 |
Redundancy | 3.4 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 390mM (NH4)2HPO4/NaH2PO4, pH 6.5, 50mM dioxane, 10mM DTT, 9-11% PEG6000, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | (NH4)2HPO4 | ||
2 | 1 | 1 | NaH2PO4 | ||
3 | 1 | 1 | dioxane | ||
4 | 1 | 1 | DTT | ||
5 | 1 | 1 | PEG6000 | ||
6 | 1 | 2 | (NH4)2HPO4 | ||
7 | 1 | 2 | NaH2PO4 | ||
8 | 1 | 2 | PEG6000 |