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2DM5

Thermodynamic Penalty Arising From Burial of a Ligand Polar Group Within a Hydrophobic Pocket of a Protein Receptor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Major Urinary Proteinpolymer17420139.41UniProt (P11589)
Pfam (PF00061)
UniProt (by SIFTS) (P11588)
Mus musculus (house mouse)
2B, C, D, E
(A)
CADMIUM IONnon-polymer112.44Chemie (CD)
3F
(A)
OCTANE-1,8-DIOLnon-polymer146.21Chemie (ODI)
4G
(A)
waterwater18.0174Chemie (HOH)
Sequence modifications
A: 1 - 162 (UniProt: P11589)
PDBExternal DatabaseDetails
Met -11-expression tag
Arg -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight20139.4
Non-Polymers*Number of molecules5
Total formula weight595.9
All*Total formula weight20735.3
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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