2DEM
Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3' | polymer | 15 | 4457.9 | 1 | synthetic construct | ||
| 2 | B (D) | 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3' | polymer | 14 | 4306.8 | 1 | synthetic construct | ||
| 3 | C (A) | uracil-DNA glycosylase | polymer | 219 | 24324.1 | 1 | GenBank (55981118) Pfam (PF03167) UniProt (by SIFTS) (Q5SJ65) | Thermus thermophilus | |
| 4 | D, F (D, A) | DIHYDROGENPHOSPHATE ION | non-polymer | 97.0 | 2 | Chemie (2HP) | |||
| 5 | E (A) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 1 | Chemie (SF4) | |||
| 6 | G, H (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 7 | I (A) | ETHANOL | non-polymer | 46.1 | 1 | Chemie (EOH) | |||
| 8 | J, K, L (C, D, A) | water | water | 18.0 | 301 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 33088.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 775.9 | |
| All* | Total formula weight | 33864.7 |
