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2DBY

Crystal structure of the GTP-binding protein YchF in complexed with GDP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
GTP-binding proteinpolymer36840659.11UniProt (Q5SJ29)
Pfam (PF01926)
Pfam (PF06071)
Thermus thermophilusGTP-binding protein YchF
2B
(A)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
3C, D, E
(A)
FORMIC ACIDnon-polymer46.03Chemie (FMT)
4F
(A)
waterwater18.0359Chemie (HOH)
Sequence modifications
A: 1 - 368 (UniProt: Q5SJ29)
PDBExternal DatabaseDetails
Mse 1Met 1modified residue
Mse 317Met 317modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight40659.1
Non-Polymers*Number of molecules4
Total formula weight581.3
All*Total formula weight41240.4
*Water molecules are not included.

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PDB entries from 2025-07-02

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