2DBY
Crystal structure of the GTP-binding protein YchF in complexed with GDP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005525 | molecular_function | GTP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0017111 | molecular_function | ribonucleoside triphosphate phosphatase activity |
| A | 0043022 | molecular_function | ribosome binding |
| A | 0043023 | molecular_function | ribosomal large subunit binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE GDP A 501 |
| Chain | Residue |
| A | ASN11 |
| A | ASN209 |
| A | VAL210 |
| A | SER242 |
| A | ALA243 |
| A | ARG244 |
| A | HOH826 |
| A | HOH858 |
| A | VAL12 |
| A | GLY13 |
| A | LYS14 |
| A | SER15 |
| A | THR16 |
| A | GLN92 |
| A | ARG108 |
| A | PHE110 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE FMT A 401 |
| Chain | Residue |
| A | HIS105 |
| A | ALA128 |
| A | HOH566 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE FMT A 402 |
| Chain | Residue |
| A | ARG155 |
| A | TYR363 |
| A | VAL364 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE FMT A 403 |
| Chain | Residue |
| A | ALA28 |
| A | ALA29 |
| A | ASN30 |
| A | PRO44 |
| A | PRO68 |
| A | THR69 |
| A | HIS70 |
| A | HOH554 |
