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2CW0

Crystal structure of Thermus thermophilus RNA polymerase holoenzyme at 3.3 angstroms resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, G, H
(A, B, K, L)
DNA-directed RNA polymerase alpha chainpolymer31535056.24UniProt (Q5SHR6)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
Thermus thermophilusDNA directed RNA polymerase holoenzyme subunit alpha, RNAP alpha subunit, Transcriptase alpha chain, RNA polymerase alpha subunit
2C, I
(C, M)
DNA-directed RNA polymerase beta chainpolymer1119125436.52UniProt (Q8RQE9)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
Thermus thermophilusDNA directed RNA polymerase holoenzyme subunit Beta, RNAP beta subunit, Transcriptase beta chain, RNA polymerase beta subunit
3D, J
(D, N)
DNA-directed RNA polymerase beta' chainpolymer1524170997.42UniProt (Q8RQE8)
Pfam (PF04997)
Pfam (PF21668)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Thermus thermophilusDNA directed RNA polymerase holoenzyme subunit Beta-prime, RNAP beta' subunit, Transcriptase beta' chain, RNA polymerase beta' subunit
4E, K
(E, O)
RNA polymerase omega chainpolymer9911521.22UniProt (Q8RQE7)
Pfam (PF01192)
Thermus thermophilusDNA directed RNA polymerase holoenzyme subunit Omega
5F, L
(F, P)
RNA polymerase sigma factor rpoDpolymer42348568.02UniProt (Q5SKW1)
Pfam (PF00140)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
Thermus thermophilusDNA directed RNA polymerase holoenzyme subunit Sigma
6M, N, P, Q
(D, N)
ZINC IONnon-polymer65.44Chemie (ZN)
7O, R
(D, N)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight853271.0
Non-Polymers*Number of molecules6
Total formula weight310.2
All*Total formula weight853581.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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