2BND
The structure of E. coli UMP kinase in complex with UDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | URIDYLATE KINASE | polymer | 241 | 26013.3 | 2 | UniProt (P29464) Pfam (PF00696) UniProt (by SIFTS) (P0A7E9) | ESCHERICHIA COLI | UMP KINASE, UK, URIDINE MONOPHOSPHATE KINASE |
| 2 | C, I (A, B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) PubChem (1158) PubChem (6031) PubChem (25323044) PubChem (25323048) PubChem (44298965) PubChem (53486216) PubChem (3084486) PubChem (60098857) PubChem (57448939) PubChem (6101632) PubChem (6604175) PubChem (91746160) PubChem (92332560) PubChem (92332561) PubChem (92332562) PubChem (92332563) PubChem (11811538) PubChem (93088131) PubChem (93630083) PubChem (12049241) | |||
| 3 | D, E, F, G, J (A, B) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) PubChem (753) | |||
| 4 | H (A) | PYROPHOSPHATE 2- | non-polymer | 176.0 | 1 | Chemie (POP) PubChem (4995) | |||
| 5 | K, L (A, B) | water | water | 18.0 | 93 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 1 (PDB: 2BND)
A, B: 2 - 241 (UniProt: P29464)
A, B: 2 - 241 (UniProt: P29464)
| PDB | External Database | Details |
|---|---|---|
| Ala 112 | Gly 111 | conflict |
| Asn 159 | Asp 158 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 52026.6 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1444.8 | |
| All* | Total formula weight | 53471.4 |
