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1ZY1

X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A) in complex with Met-Ala-Ser

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Peptide deformylase, mitochondrialpolymer19722310.72UniProt (Q9FV53)
Pfam (PF01327)
Arabidopsis thaliana (thale cress)PDF; Polypeptide deformylase
2C, D
(D, E)
tripeptide fragmentpolymer3307.42
3E, F
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
4G, H, I
(A, B, D)
waterwater18.066Chemie (HOH)
Sequence modifications
A, B: 2 - 190 (UniProt: Q9FV53)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ser 191-expression tag
His 192-expression tag
His 193-expression tag
His 194-expression tag
His 195-expression tag
His 196-expression tag
His 197-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight45236.1
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight45366.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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