1YWH

crystal structure of urokinase plasminogen activator receptor

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, C, E, G, I... (A, C, E, G, I...)	Urokinase plasminogen activator surface receptor	polymer	313	34687.1	8	UniProt (Q9UMV0) Pfam (PF00021) UniProt (by SIFTS) (Q03405)	Homo sapiens (human)	uPAR, U- PAR, Monocyte activation antigen Mo3, CD87 antigen
2	B, D, F, H, J... (B, D, F, H, J...)	antagonist peptide	polymer	13	1630.9	8
3	BA, Q, S, T (b, Q, S, T)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		570.5	4	In PDB GlyTouCan (G21290RB)
4	AA, DA, GA, R, U... (a, d, g, R, U...)	alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		367.3	8	In PDB GlyTouCan (G86851RC)
5	FA, W (f, W)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	2	In PDB GlyTouCan (G42666HT)
6	CA, EA, HA, Z (c, e, h, Z)	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	4	In PDB GlyTouCan (G22768VO)
7	BB, FB, GB, IA, JA... (I, K, A, M, O...)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	11	Chemie (NAG)
8	AB, CB, DB, EB, HB... (G, I, K, A, M...)	SULFATE ION	non-polymer		96.1	21	Chemie (SO4)
9	AC, BC, CC, DC, OB... (M, N, O, P, A...)	water	water		18.0	749	Chemie (HOH)

Sequence modifications

A, C, E, G, I, K, M, O: 1 - 313 (UniProt: Q9UMV0)

PDB	External Database	Details
Gln 200	Asn 222	conflict

Contents of the asymmetric unit

Polymers	Number of chains	16
	Total formula weight	290543.9
Branched	Number of molecules	18
	Total formula weight	9713.1
Non-Polymers*	Number of molecules	32
	Total formula weight	4450.6
All*	Total formula weight	304707.6

*Water molecules are not included.