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1YNK

Identification of Key residues of the NC6.8 Fab antibody fragment binding to synthetic sweeteners: Crystal structure of NC6.8 co-crystalized with high potency sweetener compound SC45647

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L)
immunoglobulin kappa light chainpolymer21924123.81Pfam (PF07686)
Pfam (PF07654)
UniProt (by SIFTS) (A2P1G9)
Mus musculus (house mouse)NC6.8 Fab fragment L-chain, monoclonal antibody Fab fragment
2B
(H)
Ig gamma heavy chainpolymer21923355.01UniProt (Q6PJB2)
Pfam (PF07686)
Pfam (PF07654)
Mus musculus (house mouse)NC6.8 Fab fragment H-chain
3C
(H)
2-[((R)-{[4-(AMINOMETHYL)PHENYL]AMINO}{[(1R)-1-PHENYLETHYL]AMINO}METHYL)AMINO]ETHANE-1,1-DIOLnon-polymer330.41Chemie (SC5)
4D, E
(L, H)
waterwater18.0126Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight47478.8
Non-Polymers*Number of molecules1
Total formula weight330.4
All*Total formula weight47809.3
*Water molecules are not included.

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PDB entries from 2025-06-25

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