1YF3
T4Dam in Complex with AdoHcy and 13-mer Oligonucleotide Making Non- and Semi-specific (~1/4) Contact
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (C) | 5'-D(*AP*CP*CP*AP*TP*GP*AP*TP*CP*TP*GP*AP*C)-3' | polymer | 13 | 3935.6 | 1 | |||
2 | B (D) | 5'-D(*TP*GP*TP*CP*AP*GP*AP*TP*CP*AP*TP*GP*G)-3' | polymer | 13 | 4006.6 | 1 | |||
3 | C, D (A, B) | DNA adenine methylase | polymer | 259 | 30510.0 | 2 | UniProt (P04392) Pfam (PF02086) | Enterobacteria phage T4 | Deoxyadenosyl-methyltransferase, M.EcoT4Dam |
4 | E, G (A, B) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 2 | Chemie (SAH) | |||
5 | F, H (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
6 | I, J, K, L (C, D, A, B) | water | water | 18.0 | 204 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 259 (UniProt: P04392)
PDB | External Database | Details |
---|---|---|
Tyr 119 | Asp 119 | see remark 999 |
Arg 139 | Gln 139 | see remark 999 |
Phe 140 | Tyr 140 | see remark 999 |
Leu 209 | Gln 209 | see remark 999 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 68962.2 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 953.0 | |
All* | Total formula weight | 69915.2 |