1YBD
Crystal structure analysis of uridylate kinase from Neisseria meningitidis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Uridylate kinase | polymer | 239 | 26290.5 | 3 | UniProt (P65932) Pfam (PF00696) | Neisseria meningitidis | UK, Uridine monophosphate kinase, UMP kinase |
| 2 | D (A) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 3 | E, F, G (A, B, C) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 4 | H, I, J (A, B, C) | water | water | 18.0 | 112 | Chemie (HOH) |
Sequence modifications
A, B, C: 3 - 241 (UniProt: P65932)
| PDB | External Database | Details |
|---|---|---|
| Mse 3 | Met 1 | modified residue |
| Mse 22 | Met 20 | modified residue |
| Mse 47 | Met 45 | modified residue |
| Mse 71 | Met 69 | modified residue |
| Mse 79 | Met 77 | modified residue |
| Mse 81 | Met 79 | modified residue |
| Mse 82 | Met 80 | modified residue |
| Mse 86 | Met 84 | modified residue |
| Mse 110 | Met 108 | modified residue |
| Mse 156 | Met 154 | modified residue |
| Mse 161 | Met 159 | modified residue |
| Mse 200 | Met 198 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 78871.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 322.3 | |
| All* | Total formula weight | 79193.8 |
