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1YBD

Crystal structure analysis of uridylate kinase from Neisseria meningitidis

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006225biological_processUDP biosynthetic process
A0009041molecular_functionUMP/dUMP kinase activity
A0016301molecular_functionkinase activity
A0033862molecular_functionUMP kinase activity
A0044210biological_process'de novo' CTP biosynthetic process
A0046940biological_processnucleoside monophosphate phosphorylation
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006225biological_processUDP biosynthetic process
B0009041molecular_functionUMP/dUMP kinase activity
B0016301molecular_functionkinase activity
B0033862molecular_functionUMP kinase activity
B0044210biological_process'de novo' CTP biosynthetic process
B0046940biological_processnucleoside monophosphate phosphorylation
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006221biological_processpyrimidine nucleotide biosynthetic process
C0006225biological_processUDP biosynthetic process
C0009041molecular_functionUMP/dUMP kinase activity
C0016301molecular_functionkinase activity
C0033862molecular_functionUMP kinase activity
C0044210biological_process'de novo' CTP biosynthetic process
C0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FMT A 253
ChainResidue
AALA107
AGLN112
ATHR138
AHOH255
CTHR138
CASN140
CHOH270

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 250
ChainResidue
ATHR145
AHOH260
AHOH270
ALYS15
ASER17

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 251
ChainResidue
BLYS15
BSER17
BTHR145
BHOH256
BHOH269
BHOH277

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL C 252
ChainResidue
CLYS15
CSER17
CTHR165
CHOH262

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues30
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ALYS15
AASP174
BLYS15
BGLY57
BGLY58
BARG62
BASP77
BTHR138
BTHR165
BASN166
BTYR171
AGLY57
BASP174
CLYS15
CGLY57
CGLY58
CARG62
CASP77
CTHR138
CTHR165
CASN166
CTYR171
AGLY58
CASP174
AARG62
AASP77
ATHR138
ATHR165
AASN166
ATYR171

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PDB entries from 2024-11-06

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