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1YBD

Crystal structure analysis of uridylate kinase from Neisseria meningitidis

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006225biological_processUDP biosynthetic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0033862molecular_functionUMP kinase activity
A0044210biological_process'de novo' CTP biosynthetic process
A0046940biological_processnucleoside monophosphate phosphorylation
B0000166molecular_functionnucleotide binding
B0003824molecular_functioncatalytic activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006225biological_processUDP biosynthetic process
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0033862molecular_functionUMP kinase activity
B0044210biological_process'de novo' CTP biosynthetic process
B0046940biological_processnucleoside monophosphate phosphorylation
C0000166molecular_functionnucleotide binding
C0003824molecular_functioncatalytic activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006221biological_processpyrimidine nucleotide biosynthetic process
C0006225biological_processUDP biosynthetic process
C0016301molecular_functionkinase activity
C0016740molecular_functiontransferase activity
C0033862molecular_functionUMP kinase activity
C0044210biological_process'de novo' CTP biosynthetic process
C0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FMT A 253
ChainResidue
AALA107
AGLN112
ATHR138
AHOH255
CTHR138
CASN140
CHOH270

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 250
ChainResidue
ATHR145
AHOH260
AHOH270
ALYS15
ASER17

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 251
ChainResidue
BLYS15
BSER17
BTHR145
BHOH256
BHOH269
BHOH277

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL C 252
ChainResidue
CLYS15
CSER17
CTHR165
CHOH262

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues54
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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