1Y8Z
alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a HMU base at 1.9 A resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | 5'-D(*GP*AP*TP*AP*CP*TP*(5HU)P*AP*GP*AP*TP*AP*G)-3' | polymer | 13 | 4030.6 | 1 | |||
| 2 | B (D) | 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*G)-3' | polymer | 9 | 2730.8 | 1 | |||
| 3 | C, D (A, B) | DNA alpha-glucosyltransferase | polymer | 402 | 47062.4 | 2 | UniProt (P04519) Pfam (PF11440) | Enterobacteria phage T4 | AGT |
| 4 | E, F, G, M, N (D, A, B) | COBALT HEXAMMINE(III) | non-polymer | 161.1 | 5 | Chemie (NCO) | |||
| 5 | H, O (A, B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) | |||
| 6 | I, J, K, P (A, B) | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 7 | L (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 8 | Q, R, S, T (C, D, A, B) | water | water | 18.0 | 494 | Chemie (HOH) |
Sequence modifications
A, B: 1001 - 1400 (UniProt: P04519)
| PDB | External Database | Details |
|---|---|---|
| Gly 999 | - | cloning artifact |
| Ser 1000 | - | cloning artifact |
| Cme 1014 | Cys 14 | modified residue |
| Cme 1274 | Cys 274 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 100886.3 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2017.7 | |
| All* | Total formula weight | 102904.0 |
