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1Y2D

Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 1-(4-methoxy-phenyl)-3,5-dimethyl-1H-pyrazole-4-carboxylic acid ethyl ester

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BcAMP-specific 3',5'-cyclic phosphodiesterase 4Dpolymer34940096.42UniProt (Q08499)
Pfam (PF00233)
In PDB
Homo sapiens (human)DPDE3, PDE43
2A, BZINC IONnon-polymer65.42Chemie (ZN)
3A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
4A, B1-(4-METHOXYPHENYL)-3,5-DIMETHYL-1H-PYRAZOLE-4-CARBOXYLIC ACID ETHYL ESTERnon-polymer274.32Chemie (4DE)
5B, A1,2-ETHANEDIOLnon-polymer62.124Chemie (EDO)
6B2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer282.31Chemie (B3P)
7waterwater18.0540Chemie (HOH)
Sequence modifications
A, B: 86 - 413 (UniProt: Q08499)
PDBExternal DatabaseDetails
Met 65-initiating methionine
Gly 66-cloning artifact
Ser 67-cloning artifact
Ser 68-cloning artifact
His 69-expression tag
His 70-expression tag
His 71-expression tag
His 72-expression tag
His 73-expression tag
His 74-expression tag
Ser 75-cloning artifact
Ser 76-cloning artifact
Gly 77-cloning artifact
Leu 78-cloning artifact
Val 79-cloning artifact
Pro 80-cloning artifact
Arg 81-cloning artifact
Gly 82-cloning artifact
Ser 83-cloning artifact
His 84-cloning artifact
Met 85-cloning artifact
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight80192.7
Non-Polymers*Number of molecules31
Total formula weight2500.0
All*Total formula weight82692.7
*Water molecules are not included.

222624

PDB entries from 2024-07-17

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