1UBD
CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA (5'-D(*AP*GP*GP*GP*TP*CP*TP*CP*CP*AP*TP*TP*TP*TP*GP*AP*A P*GP*CP*G)-3') | polymer | 20 | 6165.0 | 1 | |||
| 2 | B (B) | DNA (5'-D(*CP*GP*CP*TP*TP*CP*AP*AP*AP*AP*TP*GP*GP*AP*GP*AP*C P*CP*CP*T)-3') | polymer | 20 | 6103.0 | 1 | |||
| 3 | C (C) | PROTEIN (YY1 ZINC FINGER DOMAIN) | polymer | 124 | 14189.5 | 1 | UniProt (P25490) Pfam (PF00096) | Homo sapiens (human) | |
| 4 | D, E, F, G (C) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | H, I, J (A, B, C) | water | water | 18.0 | 87 | Chemie (HOH) |
Sequence modifications
C: 291 - 414 (UniProt: P25490)
| PDB | External Database | Details |
|---|---|---|
| Met 291 | Asp 291 | engineered mutation |
| Glu 292 | Ala 292 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 26457.4 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 261.6 | |
| All* | Total formula weight | 26719.1 |
