1UBD

CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 501

Chain	Residue
C	CYS298
C	CYS303
C	HIS316
C	HIS320

---

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 502

Chain	Residue
C	CYS327
C	CYS330
C	HIS343
C	HIS347

---

site_id	AC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 503

Chain	Residue
C	CYS360
C	HIS373
C	HIS377
C	CYS355

---

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 504

Chain	Residue
C	CYS385
C	CYS390
C	HIS403
C	HIS407

---

Functional Information from PROSITE/UniProt

site_id	PS00028
Number of Residues	23
Details	ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CphkgCtkmFrdnsamrkHlht..H

Chain	Residue	Details
C	CYS298-HIS320
C	CYS327-HIS347
C	CYS355-HIS377
C	CYS385-HIS407

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	24
Details	ZN_FING: C2H2-type 1 => ECO:0000255|PROSITE-ProRule:PRU00042

Chain	Residue	Details
C	ARG294-HIS318

---

site_id	SWS_FT_FI2
Number of Residues	22
Details	ZN_FING: C2H2-type 2 => ECO:0000255|PROSITE-ProRule:PRU00042

Chain	Residue	Details
C	ARG323-LEU345

---

site_id	SWS_FT_FI3
Number of Residues	24
Details	ZN_FING: C2H2-type 3 => ECO:0000255|PROSITE-ProRule:PRU00042

Chain	Residue	Details
C	LYS351-ARG375

---

site_id	SWS_FT_FI4
Number of Residues	24
Details	ZN_FING: C2H2-type 4 => ECO:0000255|PROSITE-ProRule:PRU00042

Chain	Residue	Details
C	ARG381-LEU405

---

site_id	SWS_FT_FI5
Number of Residues	16
Details	BINDING: BINDING => ECO:0000269|PubMed:8942976, ECO:0007744|PDB:1UBD

Chain	Residue	Details
C	ILE296
C	GLU358
C	ARG371
C	ARG375
C	TYR383
C	ASP388
C	LYS401
C	LEU405
C	LYS301
C	ARG314
C	HIS318
C	HIS325
C	ALA328
C	LYS341
C	LEU345
C	PHE353

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	MOD_RES: Phosphothreonine => ECO:0007744|PubMed:18669648

Chain	Residue	Details
C	ILE376

---

site_id	SWS_FT_FI7
Number of Residues	3
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733

Chain	Residue	Details
C	HIS407
C	LYS409

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