1T8Q
Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Glycerophosphoryl diester phosphodiesterase, periplasmic | polymer | 336 | 38944.2 | 4 | UniProt (P09394) Pfam (PF03009) | Escherichia coli | Glycerophosphodiester phosphodiesterase |
| 2 | E, I, L, P (A, B, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 3 | F, G, H, J, K... (A, B, C, D) | GLYCEROL | non-polymer | 92.1 | 11 | Chemie (GOL) | |||
| 4 | T, U, V, W (A, B, C, D) | water | water | 18.0 | 1160 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 25 - 358 (UniProt: P09394)
| PDB | External Database | Details |
|---|---|---|
| Ser 23 | - | cloning artifact |
| Asn 24 | - | cloning artifact |
| Mse 53 | Met 53 | modified residue |
| Mse 68 | Met 68 | modified residue |
| Mse 138 | Met 138 | modified residue |
| Mse 226 | Met 226 | modified residue |
| Mse 228 | Met 228 | modified residue |
| Mse 261 | Met 261 | modified residue |
| Mse 267 | Met 267 | modified residue |
| Mse 283 | Met 283 | modified residue |
| Mse 299 | Met 299 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 155776.8 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1110.3 | |
| All* | Total formula weight | 156887.1 |
