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1SL0

Ternary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template and an incoming nucleotide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(P, Q)
5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3'polymer216426.22
2B, D
(T, U)
5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3'polymer257922.12
3E, G
(A, C)
DNA polymerasepolymer69879089.82UniProt (P00581)
Pfam (PF00476)
Enterobacteria phage T7T7 DNA polymerase
4F, H
(B, D)
Thioredoxin 1polymer10811687.42UniProt (P0AA25)
Pfam (PF00085)
Escherichia coliTRX1, TRX
5I, K
(A, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6J, L
(A, C)
2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATEnon-polymer475.22Chemie (DAD)
Sequence modifications
A, C: 1 - 704 (UniProt: P00581)
PDBExternal DatabaseDetails
-Lys 118deletion
-Arg 119deletion
-Phe 120deletion
-Gly 121deletion
-Ser 122deletion
-His 123deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight210250.9
Non-Polymers*Number of molecules4
Total formula weight999.0
All*Total formula weight211249.8
*Water molecules are not included.

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PDB entries from 2025-07-30

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