1RD8
Crystal Structure of the 1918 Human H1 Hemagglutinin Precursor (HA0)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E (A, C, E) | hemagglutinin | polymer | 335 | 36971.4 | 3 | GenBank (4325039) Pfam (PF00509) UniProt (by SIFTS) (Q9WFX3) | Influenza A virus | |
2 | B, D, F (B, D, F) | hemagglutinin | polymer | 182 | 20804.0 | 3 | GenBank (4325039) Pfam (PF00509) UniProt (by SIFTS) (Q9WFX3) | Influenza A virus | |
3 | G, I (G, I) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
4 | H (H) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
5 | J, K, L, N, O... (A, B, C, E) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
6 | M (B) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) |
Sequence modifications
A, C, E: 11 - 329 (GenBank: 4325039)
B, D, F: 1 - 175 (GenBank: 4325039)
PDB | External Database | Details |
---|---|---|
Ala 3 | - | cloning artifact |
Asp 4 | - | cloning artifact |
Pro 5 | - | cloning artifact |
Gly 6 | - | cloning artifact |
Tyr 7 | - | cloning artifact |
Leu 8 | - | cloning artifact |
Leu 9 | - | cloning artifact |
Glu 10 | - | cloning artifact |
PDB | External Database | Details |
---|---|---|
Arg 177 | Lys 521 | cloning artifact |
Ser 178 | - | cloning artifact |
Leu 179 | - | cloning artifact |
Val 180 | - | cloning artifact |
Pro 181 | - | cloning artifact |
Arg 182 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 173326.2 | |
Branched | Number of molecules | 3 |
Total formula weight | 1921.8 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1422.2 | |
All* | Total formula weight | 176670.2 |