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1RD8

Crystal Structure of the 1918 Human H1 Hemagglutinin Precursor (HA0)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2003-02-21
DetectorADSC QUANTUM 315
Wavelength(s)0.984
Spacegroup nameC 1 2 1
Unit cell lengths190.529, 109.953, 136.238
Unit cell angles90.00, 108.63, 90.00
Refinement procedure
Resolution49.400

*

- 3.000
R-factor0.27128
Rwork0.270
R-free0.29600

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle1.850

*

Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.400

*

3.070
High resolution limit [Å]3.0003.000
Rmerge0.146

*

0.520

*

Total number of observations125868

*

Number of reflections513463368

*

<I/σ(I)>7.61.4
Completeness [%]96.495.1

*

Redundancy2.52.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5294sodium phosphate, potassium phosphate, sodium citrate, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirsodium dihydrogen phosphate1.68 (M)
31reservoirdipotassium hydrogen phosphate0.32 (M)
41reservoirphosphate citrate0.1 (M)pH5.5

221716

PDB entries from 2024-06-26

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