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1R9T

RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(R)
RNA strandpolymer103264.01
2B
(T)
DNA template strandpolymer288534.51
3C
(N)
DNA nontemplate strandpolymer144286.81
4D
(A)
DNA-directed RNA polymerase II largest subunitpolymer1733191821.61UniProt (P04050)
Pfam (PF04997)
Pfam (PF05001)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04992)
Pfam (PF04990)
Saccharomyces cerevisiae (baker's yeast)
5E
(B)
DNA-directed RNA polymerase II 140 kDa polypeptidepolymer1224138937.31UniProt (P08518)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF04566)
Pfam (PF04567)
Pfam (PF00562)
Pfam (PF04560)
Saccharomyces cerevisiae (baker's yeast)
6F
(C)
DNA-directed RNA polymerase II 45 kDa polypeptidepolymer31835330.51UniProt (P16370)
Pfam (PF01193)
Pfam (PF01000)
Saccharomyces cerevisiae (baker's yeast)
7G
(E)
DNA-directed RNA polymerases I, II, and III 27 kDa polypeptidepolymer21525117.11UniProt (P20434)
Pfam (PF03871)
Pfam (PF01191)
Saccharomyces cerevisiae (baker's yeast)
8H
(F)
DNA-directed RNA polymerases I, II, and III 23 kDa polypeptidepolymer15517931.81UniProt (P20435)
Pfam (PF01192)
Saccharomyces cerevisiae (baker's yeast)
9I
(H)
DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptidepolymer14616525.41UniProt (P20436)
Pfam (PF03870)
Saccharomyces cerevisiae (baker's yeast)
10J
(I)
DNA-directed RNA polymerase II 14.2 kDa polypeptidepolymer12214308.21UniProt (P27999)
Pfam (PF02150)
Pfam (PF01096)
Saccharomyces cerevisiae (baker's yeast)
11K
(J)
DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptidepolymer708290.71UniProt (P22139)
Pfam (PF01194)
Saccharomyces cerevisiae (baker's yeast)
12L
(K)
DNA-directed RNA polymerase II 13.6 kDa polypeptidepolymer12013633.51UniProt (P38902)
Pfam (PF13656)
Saccharomyces cerevisiae (baker's yeast)
13M
(L)
DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptidepolymer707730.01UniProt (P40422)
Pfam (PF03604)
Saccharomyces cerevisiae (baker's yeast)
14N, O, R, T, U...
(A, B, C, I, J...)
ZINC IONnon-polymer65.48Chemie (ZN)
15P, Q
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
16S
(B)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight485711.3
Non-Polymers*Number of molecules11
Total formula weight1079.1
All*Total formula weight486790.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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