1ONQ
Crystal Structure of CD1a in Complex with a Sulfatide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | T-cell surface glycoprotein CD1a | polymer | 283 | 32510.4 | 2 | UniProt (P06126) Pfam (PF16497) Pfam (PF07654) In PDB | Homo sapiens (human) | CD1a antigen, T-cell surface antigen T6/Leu-6, hTa1 thymocyte antigen |
2 | B, D | Beta-2-microglobulin | polymer | 99 | 11748.2 | 2 | UniProt (P01884) Pfam (PF07654) UniProt (by SIFTS) (P61769) In PDB | Homo sapiens (human) | HDCMA22P |
3 | E, G, H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
4 | F | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
5 | A, C | alpha-L-fucopyranose | non-polymer | 164.2 | 2 | Chemie (FUC) | |||
6 | A, C | SULFATE-3-D-GALACTOSYL-BETA-1-1-N-STEAROYL-D-SPHINGOSINE | non-polymer | 808.2 | 2 | Chemie (SLF) | |||
7 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
8 | water | water | 18.0 | 450 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 277 (UniProt: P06126)
PDB | External Database | Details |
---|---|---|
His 278 | - | expression tag |
His 279 | - | expression tag |
His 280 | - | expression tag |
His 281 | - | expression tag |
His 282 | - | expression tag |
His 283 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 88517.1 | |
Branched | Number of molecules | 4 |
Total formula weight | 1640.6 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 2165.8 | |
All* | Total formula weight | 92323.5 |