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1O5G

Dissecting and Designing Inhibitor Selectivity Determinants at the S1 site Using an Artificial Ala190 Protease (Ala190 uPA)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L)
Prothrombinpolymer364096.51UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)Coagulation factor II
2B
(H)
Prothrombinpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)Coagulation factor II
3C
(I)
Hirudin IIIB'polymer111491.51UniProt (P28511)
UniProt (by SIFTS) (P28504)
Hirudo medicinalis
4D
(H)
SODIUM IONnon-polymer23.01Chemie (NA)
PubChem (923)
5E
(H)
CALCIUM IONnon-polymer40.11Chemie (CA)
PubChem (271)
6F
(H)
2-{5-[AMINO(IMINIO)METHYL]-6-FLUORO-1H-BENZIMIDAZOL-2-YL}-6-[(2-METHYLCYCLOHEXYL)OXY]BENZENOLATEnon-polymer382.41Chemie (CR9)
7G, H, I
(L, H, I)
waterwater18.0118Chemie (HOH)
Sequence modifications
I: 55 - 65 (UniProt: P28511)
PDBExternal DatabaseDetails
Tys 63Tyr 63modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight35368.3
Non-Polymers*Number of molecules3
Total formula weight445.5
All*Total formula weight35813.8
*Water molecules are not included.

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PDB entries from 2026-03-25

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