1NPL
MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM DAFFODIL (NARCISSUS PSEUDONARCISSUS) BULBS IN COMPLEX WITH MANNOSE-ALPHA1,3-MANNOSE
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | PROTEIN (AGGLUTININ) | polymer | 109 | 12209.5 | 1 | GenBank (289871) UniProt (by SIFTS) (C0HM45) | Narcissus pseudonarcissus (daffodil) | DAFFODIL LECTIN |
| 2 | B, C, D, E (B, C, D, E) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose | branched | 342.3 | 4 | In PDB BIRD (PRD_900112) GlyTouCan (G00891MP) | 3alpha-alpha-mannobiose | ||
| 3 | F, G, H (A) | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
| 4 | I (A) | water | water | 18.0 | 97 | Chemie (HOH) |
Sequence modifications
A: 1 - 109 (GenBank: 289871)
| PDB | External Database | Details |
|---|---|---|
| Phe 15 | Tyr 38 | conflict |
| Asn 17 | Ser 40 | conflict |
| Asn 18 | Tyr 41 | conflict |
| Glu 27 | Gln 50 | conflict |
| Asp 35 | Asn 58 | conflict |
| Leu 48 | Val 71 | conflict |
| Asp 49 | Ser 72 | conflict |
| Arg 50 | Ser 73 | conflict |
| Arg 51 | Gly 74 | conflict |
| Ser 58 | Thr 81 | conflict |
| Pro 67 | Arg 90 | conflict |
| Arg 68 | Lys 91 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 12209.5 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1369.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 284.9 | |
| All* | Total formula weight | 13863.6 |
