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1N48

Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3'polymer134105.71
2B
(C)
5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'polymer164621.01
3C
(A)
DNA polymerase IVpolymer35240257.91UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricusdpo4, DNA polymerase IV, Repair DNA polymerase of the DinB/UmuC superfamily, dinP
4D, F, G
(B, A)
CALCIUM IONnon-polymer40.13Chemie (CA)
5E
(B)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
6H, I, J
(B, C, A)
waterwater18.0389Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48984.5
Non-Polymers*Number of molecules4
Total formula weight627.4
All*Total formula weight49612.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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