1M8V
Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (O, P, Q, R, S...) | 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3' | polymer | 7 | 2098.2 | 7 | |||
| 2 | H, I, J, K, L... (A, B, C, D, E...) | PUTATIVE SNRNP SM-LIKE PROTEIN | polymer | 77 | 8630.0 | 14 | UniProt (Q9V0Y8) Pfam (PF01423) | Pyrococcus abyssi | Sm protein PA-Sm1 |
| 3 | AA, BA, V, W, X... (T, U, O, P, Q...) | CALCIUM ION | non-polymer | 40.1 | 7 | Chemie (CA) | |||
| 4 | CA, DA, EA, FA, GA... (A, B, C, D, E...) | URIDINE-5'-MONOPHOSPHATE | non-polymer | 324.2 | 14 | Chemie (U5P) | |||
| 5 | AB, BB, CB, DB, EB... (D, E, F, G, H...) | water | water | 18.0 | 205 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N: 101 - 175 (UniProt: Q9V0Y8)
| PDB | External Database | Details |
|---|---|---|
| Gly 99 | - | cloning artifact |
| Ala 102 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 21 |
| Total formula weight | 135507.8 | |
| Non-Polymers* | Number of molecules | 21 |
| Total formula weight | 4819.1 | |
| All* | Total formula weight | 140326.9 |
