1L9H
Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | rhodopsin | polymer | 349 | 39057.5 | 2 | UniProt (P02699) Pfam (PF10413) Pfam (PF00001) | Bos taurus (cattle) | |
| 2 | C (C) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G62182OO) | |||
| 3 | D, F (D, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | E (E) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G48068RF) | |||
| 5 | AA, BA, G, H, I... (B, A) | nonyl beta-D-glucopyranoside | non-polymer | 306.4 | 7 | Chemie (BNG) | |||
| 6 | CA, DA, EA, L, M... (B, A) | MERCURY (II) ION | non-polymer | 200.6 | 6 | Chemie (HG) | |||
| 7 | FA, GA, HA, O, P... (B, A) | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) | |||
| 8 | S, T, U, V (A) | HEPTANE-1,2,3-TRIOL | non-polymer | 148.2 | 4 | Chemie (HTO) | |||
| 9 | IA, KA, W, Y, Z (B, A) | PALMITIC ACID | non-polymer | 256.4 | 5 | Chemie (PLM) | |||
| 10 | JA, X (B, A) | RETINAL | non-polymer | 284.4 | 2 | Chemie (RET) | |||
| 11 | LA, MA (A, B) | water | water | 18.0 | 26 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 78115.0 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2184.0 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 6250.0 | |
| All* | Total formula weight | 86549.0 |
