1L9H
Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | rhodopsin | polymer | 349 | 39057.5 | 2 | UniProt (P02699) Pfam (PF10413) Pfam (PF00001) | Bos taurus (cattle) | |
| 2 | C (C) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G62182OO) | |||
| 3 | D, F (D, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | E (E) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G48068RF) | |||
| 5 | AA, BA, G, H, I... (B, A) | nonyl beta-D-glucopyranoside | non-polymer | 306.4 | 7 | Chemie (BNG) PubChem (57484544) PubChem (67410050) PubChem (67410054) PubChem (67410579) PubChem (67410580) PubChem (67410693) PubChem (67411265) PubChem (67411760) PubChem (67412070) PubChem (67412159) PubChem (67412975) PubChem (67413017) PubChem (71245600) PubChem (113558) PubChem (155448) PubChem (92471074) PubChem (92471075) PubChem (94290254) PubChem (94290256) PubChem (95566082) PubChem (95566083) PubChem (101527253) PubChem (129854788) PubChem (131676744) PubChem (9818005) PubChem (136212546) PubChem (11415532) PubChem (12986435) PubChem (14656373) | |||
| 6 | CA, DA, EA, L, M... (B, A) | MERCURY (II) ION | non-polymer | 200.6 | 6 | Chemie (HG) PubChem (26623) | |||
| 7 | FA, GA, HA, O, P... (B, A) | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) | |||
| 8 | S, T, U, V (A) | HEPTANE-1,2,3-TRIOL | non-polymer | 148.2 | 4 | Chemie (HTO) | |||
| 9 | IA, KA, W, Y, Z (B, A) | PALMITIC ACID | non-polymer | 256.4 | 5 | Chemie (PLM) | |||
| 10 | JA, X (B, A) | RETINAL | non-polymer | 284.4 | 2 | Chemie (RET) PubChem (23254473) PubChem (177675058) PubChem (5280490) PubChem (5381765) PubChem (1070) PubChem (87082476) PubChem (87110449) PubChem (87110609) PubChem (88398773) PubChem (88407543) PubChem (638015) PubChem (5353924) PubChem (6436079) PubChem (6436082) PubChem (134688327) PubChem (11426127) PubChem (12227253) PubChem (12227254) PubChem (12227256) PubChem (12227257) PubChem (12227258) PubChem (12227259) PubChem (12227269) PubChem (12227270) PubChem (12227271) PubChem (140510408) PubChem (145826762) PubChem (169423542) PubChem (172878320) | |||
| 11 | LA, MA (A, B) | water | water | 18.0 | 26 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 78115.0 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2184.0 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 6250.0 | |
| All* | Total formula weight | 86549.0 |
